Download MendeleyX-ray structure of Northeast Structural Genomics target protein sr145 from Bacillus subtilis
Kuzin, A.P., Edstrom, W., Vorobiev, S.M., Shastry, R., Ma, L.-C., Xiao, R., Acton, T., Montelione, G.T., Tong, L., Hunt, J.F.To be published.
1TO0
X-ray structure of Northeast Structural Genomics target protein sr145 from Bacillus subtilis
- PDB DOI: https://doi.org/10.2210/pdb1TO0/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Bacillus subtilis
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2004-06-11 Released: 2004-07-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.290
- R-Value Work: 0.237
- R-Value Observed: 0.237
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical UPF0247 protein yyda | 167 | Bacillus subtilis | Mutation(s): 6 Gene Names: YYDA, BSU40230 |  | |
UniProt | |||||
Find proteins for Q45601 (Bacillus subtilis (strain 168)) Explore Q45601 Go to UniProtKB: Q45601 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q45601 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F, G, H | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.290
- R-Value Work: 0.237
- R-Value Observed: 0.237
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 98.691 | α = 90 |
| b = 70.553 | β = 95.16 |
| c = 100.488 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| COMO | phasing |
Entry History
Deposition Data
- Released Date: 2004-07-20 Deposition Author(s): Kuzin, A.P., Edstrom, W., Vorobiev, S.M., Shastry, R., Ma, L.-C., Xiao, R., Acton, T., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2004-07-20
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-08-23
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.4: 2023-11-15
Changes: Data collection
