Download MendeleyCrystal Structure of the Shifted Form of the Glucose-Fructose Oxidoreductase from Zymomonas mobilis
Kim, Y., Arora, M., Straza, M., Donnelly, M., Joachimiak, A.To be published.
1RYE
Crystal Structure of the Shifted Form of the Glucose-Fructose Oxidoreductase from Zymomonas mobilis
- PDB DOI: https://doi.org/10.2210/pdb1RYE/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Zymomonas mobilis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2003-12-22 Released: 2005-02-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.276
- R-Value Work: 0.212
- R-Value Observed: 0.212
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| glucose-fructose oxidoreductase | 387 | Zymomonas mobilis | Mutation(s): 0 EC: 1.1.99.28 |  | |
UniProt | |||||
Find proteins for Q07982 (Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)) Explore Q07982 Go to UniProtKB: Q07982 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q07982 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NDP Query on NDP | E [auth A], H [auth B], J [auth C], K [auth D] | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H30 N7 O17 P3 ACFIXJIJDZMPPO-NNYOXOHSSA-N |  | ||
| GOL Query on GOL | G [auth A], I [auth B], L [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| BME Query on BME | F [auth A] | BETA-MERCAPTOETHANOL C2 H6 O S DGVVWUTYPXICAM-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.276
- R-Value Work: 0.212
- R-Value Observed: 0.212
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 49.868 | α = 90 |
| b = 152.98 | β = 103.66 |
| c = 101.992 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| d*TREK | data reduction |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| EPMR | phasing |
Entry History
Deposition Data
- Released Date: 2005-02-15 Deposition Author(s): Kim, Y., Arora, M., Straza, M., Donnelly, M., Joachimiak, A.
Revision History (Full details and data files)
- Version 1.0: 2005-02-15
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2023-08-23
Changes: Data collection, Database references, Derived calculations, Refinement description
