Download MendeleyStructure of a probable thiol peroxidase from Streptococcus pneumoniae
Kniewel, R., Buglino, J., Solorzano, V., Wu, J., Lima, C.D.To be published.
1PSQ
Structure of a probable thiol peroxidase from Streptococcus pneumoniae
- PDB DOI: https://doi.org/10.2210/pdb1PSQ/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Streptococcus pneumoniae
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2003-06-21 Released: 2003-07-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.200
- R-Value Observed: 0.200
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| probable thiol peroxidase | 163 | Streptococcus pneumoniae | Mutation(s): 3 Gene Names: TPX EC: 1.11.1 |  | |
UniProt | |||||
Find proteins for P0C2J8 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Explore P0C2J8 Go to UniProtKB: P0C2J8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0C2J8 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.200
- R-Value Observed: 0.200
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 102.005 | α = 90 |
| b = 49.897 | β = 116.85 |
| c = 81.66 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| RESOLVE | model building |
| CNS | refinement |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2003-07-08 Deposition Author(s): Kniewel, R., Buglino, J., Solorzano, V., Wu, J., Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2003-07-08
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2011-11-16
Changes: Atomic model - Version 1.4: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
