1PGV

Structural Genomics of Caenorhabditis elegans: tropomodulin C-terminal domain

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.209 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history. 


Literature

Structural genomics of Caenorhabditis elegans: crystal structure of the tropomodulin C-terminal domain

Lu, S., Symersky, J., Li, S., Carson, M., Chen, L., Meehan, E., Luo, M.

(2004) Proteins 56: 384-386

  • DOI: https://doi.org/10.1002/prot.10597
  • Primary Citation of Related Structures:  
    1PGV
    • Organizational Affiliation: 

    Southeast Collaboratory for Structural Genomics, Center for Biophysical Science and Egineering, University of Alabama at Birmingham, Birmingham, Alabama 35294, USA.


Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
tropomodulin TMD-1197Caenorhabditis elegansMutation(s): 0 
UniProt
Find proteins for O01479 (Caenorhabditis elegans)
Explore O01479 
Go to UniProtKB:  O01479
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO01479
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.209 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 31.706α = 90
b = 50.621β = 90
c = 107.132γ = 90
Software Package:
Software NamePurpose
MAR345data collection
HKL-2000data reduction
AMoREphasing
ARP/wARPmodel building
CNSrefinement
HKL-2000data scaling

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2003-06-10
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-11
    Changes: Refinement description
  • Version 1.4: 2023-08-16
    Changes: Data collection, Database references, Refinement description