1NV4
Fructose-1,6-Bisphosphatase Complex with Magnesium, Fructose-6-Phosphate, Phosphate, EDTA and Thallium (1 mM)
- PDB DOI: https://doi.org/10.2210/pdb1NV4/pdb
- Classification: HYDROLASE
- Organism(s): Sus scrofa
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2003-02-02 Released: 2003-07-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.236
- R-Value Work: 0.184
- R-Value Observed: 0.189
This is version 1.5 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fructose-1,6-bisphosphatase | 337 | Sus scrofa | Mutation(s): 0 EC: 3.1.3.11 |  | |
UniProt | |||||
Find proteins for P00636 (Sus scrofa) Explore P00636 Go to UniProtKB: P00636 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00636 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| F6P Query on F6P | B [auth A] | 6-O-phosphono-beta-D-fructofuranose C6 H13 O9 P BGWGXPAPYGQALX-ARQDHWQXSA-N |  | ||
| TL Query on TL | G [auth A], H [auth A], I [auth A] | THALLIUM (I) ION Tl ZLUSCZLCHQSJRU-UHFFFAOYSA-N |  | ||
| PO4 Query on PO4 | E [auth A], F [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
| MG Query on MG | C [auth A], D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.236
- R-Value Work: 0.184
- R-Value Observed: 0.189
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.074 | α = 90 |
| b = 82.829 | β = 90 |
| c = 165.173 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CrystalClear | data collection |
| CrystalClear | data reduction |
| CNS | refinement |
| SHELXL-97 | refinement |
| CrystalClear | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-07-08 Deposition Author(s): Choe, J., Iancu, C.V., Fromm, H.J., Honzatko, R.B.
Revision History (Full details and data files)
- Version 1.0: 2003-07-08
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2019-11-20
Changes: Advisory, Derived calculations - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.5: 2023-10-25
Changes: Data collection, Database references, Refinement description, Structure summary
