1NAA
Cellobiose Dehydrogenase Flavoprotein Fragment in Complex with Cellobionolactam
- PDB DOI: https://doi.org/10.2210/pdb1NAA/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Phanerodontia chrysosporium
- Mutation(s): No
- Deposited: 2002-11-27 Released: 2003-01-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.185
- R-Value Work: 0.146
- R-Value Observed: 0.146
This is version 2.1 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cellobiose dehydrogenase | 541 | Phanerodontia chrysosporium | Mutation(s): 0 EC: 1.1.99.18 |  | |
UniProt | |||||
Find proteins for Q01738 (Phanerodontia chrysosporium) Explore Q01738 Go to UniProtKB: Q01738 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q01738 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 6FA Query on 6FA | F [auth A], J [auth B] | 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O16 P2 BJSUUWFQAMLNKU-OKXKTURISA-N |  | ||
| ABL Query on ABL | G [auth A], K [auth B] | (2R,3R,4R,5R)-4,5-dihydroxy-2-(hydroxymethyl)-6-oxopiperidin-3-yl beta-D-glucopyranoside C12 H21 N O10 WXSNJJDPPISYEF-ZNLUKOTNSA-N |  | ||
| NAG Query on NAG | C [auth A], D [auth A], E [auth A], H [auth B], I [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.185
- R-Value Work: 0.146
- R-Value Observed: 0.146
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 185.952 | α = 90 |
| b = 185.952 | β = 90 |
| c = 81.438 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SCALA | data scaling |
| CNS | refinement |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-01-14 Deposition Author(s): Hallberg, B.M., Henriksson, G., Pettersson, G., Vasella, A., Divne, C.
Revision History (Full details and data files)
- Version 1.0: 2003-01-14
Type: Initial release - Version 1.1: 2008-04-28
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2014-11-12
Changes: Structure summary - Version 1.4: 2019-07-24
Changes: Data collection, Derived calculations, Refinement description - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Structure summary - Version 2.1: 2023-08-16
Changes: Data collection, Database references, Refinement description, Structure summary
