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Alanine racemase bound with N-(5'-phosphopyridoxyl)-D-alanine
1L6G
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 88031.48
    Molecule: alanine racemase
    Polymer: 1 Type: protein Length: 388
    Chains: A, B
    EC#: 5.1.1.1   
    Organism: Geobacillus stearothermophilus
    Gene Names: alr dal
    UniProtKB: Protein Feature View | Search PDB | P10724  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Geobacillus stearothermophilus   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1L6F  1L6F contains the same protein bound with N-(5'-phosphopyridoxyl)-L-alanine 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PDD
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    PDD C11 H17 N2 O7 P
    N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE
    PDD:1L6G
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    KCX
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    KCX C7 H14 N2 O4 LYS lPeptideLinking
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Watanabe, A.,  Yoshimura, T.,  Mikami, B.,  Hayashi, H.,  Kagamiyama, H.,  Esaki, N.

    Deposition:   2002-03-10
    Release:   2002-06-05
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.00
    R-Value: 0.169 (obs.)
    R-Free: 0.216
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 99.79 α = 90.00 
    b = 90.71 β = 90.00 
    c = 85.27 γ = 90.00