Download MendeleyRefined Structure of Yeast Inorganic Pyrophosphatase and its K61R Mutant
Swaminathan, K., Cooperman, B.S., Lahti, R., Voet, D.To be published.
1HUK
REFINED STRUCTURE OF YEAST INORGANIC PYROPHOSPHATASE AND ITS K61R MUTANT
- PDB DOI: https://doi.org/10.2210/pdb1HUK/pdb
- Classification: HYDROLASE
- Organism(s): Saccharomyces cerevisiae
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 1997-12-26 Released: 1998-04-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.288
- R-Value Work: 0.193
- R-Value Observed: 0.193
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| INORGANIC PYROPHOSPHATASE | 281 | Saccharomyces cerevisiae | Mutation(s): 0 EC: 3.6.1.1 |  | |
UniProt | |||||
Find proteins for P00817 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P00817 Go to UniProtKB: P00817 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00817 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | C [auth A], D [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.288
- R-Value Work: 0.193
- R-Value Observed: 0.193
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 69.09 | α = 90 |
| b = 93.06 | β = 99.62 |
| c = 51.58 | γ = 90 |
| Software Name | Purpose |
|---|---|
| X-PLOR | model building |
| X-PLOR | refinement |
| DENZO | data reduction |
| X-PLOR | phasing |
Entry History
Deposition Data
- Released Date: 1998-04-08 Deposition Author(s): Swaminathan, K., Cooperman, B.S., Lahti, R., Voet, D.
Revision History (Full details and data files)
- Version 1.0: 1998-04-08
Type: Initial release - Version 1.1: 2008-03-03
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-08-09
Changes: Database references, Derived calculations, Other, Refinement description
