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CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION. THIS FILE, 1GIY, CONTAINS THE 50S RIBOSOME SUBUNIT. THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES ARE IN THE FILE 1GIX
 
 
DOI:10.2210/pdb1giy/pdb   NDB ID: RR0032
1GIY
 
Split Entry
The asymmetric unit for this structure is composed of multiple PDB entries:
1GIX   1GIY  
Download All Files   
 
 
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 1344684.23
     
    Molecule:50S 23S RIBOSOMAL RNA
    Polymer:1Type:polyribonucleotideLength:2916
    Chains:A
    Molecule:50S 5S RIBOSOMAL RNA
    Polymer:2Type:polyribonucleotideLength:123
    Chains:B
    Molecule:50S RIBOSOMAL PROTEIN L1
    Polymer:3Type:polypeptide(L)Length:228
    Chains:C
    Molecule:50S RIBOSOMAL PROTEIN L2
    Polymer:4Type:polypeptide(L)Length:178
    Chains:D
    Molecule:50S RIBOSOMAL PROTEIN L3
    Polymer:5Type:polypeptide(L)Length:338
    Chains:E
    Molecule:50S RIBOSOMAL PROTEIN L4
    Polymer:6Type:polypeptide(L)Length:246
    Chains:F
    Molecule:50S RIBOSOMAL PROTEIN L5
    Polymer:7Type:polypeptide(L)Length:176
    Chains:G
    Molecule:50S RIBOSOMAL PROTEIN L6
    Polymer:8Type:polypeptide(L)Length:177
    Chains:H
    Molecule:50S RIBOSOMAL PROTEIN L7/L12
    Polymer:9Type:polypeptide(L)Length:128
    Chains:I, J
    Molecule:50S RIBOSOMAL PROTEIN L9
    Polymer:10Type:polypeptide(L)Length:149
    Chains:K
    Molecule:50S RIBOSOMAL PROTEIN L11
    Polymer:11Type:polypeptide(L)Length:141
    Chains:L
    Molecule:50S RIBOSOMAL PROTEIN L13
    Polymer:12Type:polypeptide(L)Length:145
    Chains:M
    Molecule:50S RIBOSOMAL PROTEIN L14
    Polymer:13Type:polypeptide(L)Length:122
    Chains:N
    Molecule:50S RIBOSOMAL PROTEIN L15
    Polymer:14Type:polypeptide(L)Length:164
    Chains:O
    Molecule:50S RIBOSOMAL PROTEIN L16
    Polymer:15Type:polypeptide(L)Length:138
    Chains:P
    Molecule:50S RIBOSOMAL PROTEIN L18
    Polymer:16Type:polypeptide(L)Length:186
    Chains:Q
    Molecule:50S RIBOSOMAL PROTEIN L19
    Polymer:17Type:polypeptide(L)Length:66
    Chains:R
    Molecule:50S RIBOSOMAL PROTEIN L22
    Polymer:18Type:polypeptide(L)Length:113
    Chains:S
    Molecule:50S RIBOSOMAL PROTEIN L23
    Polymer:19Type:polypeptide(L)Length:84
    Chains:T
    Molecule:50S RIBOSOMAL PROTEIN L24
    Polymer:20Type:polypeptide(L)Length:119
    Chains:U
    Molecule:50S RIBOSOMAL PROTEIN L25
    Polymer:21Type:polypeptide(L)Length:94
    Chains:V
    Molecule:50S RIBOSOMAL PROTEIN L29
    Polymer:22Type:polypeptide(L)Length:70
    Chains:W
    Molecule:50S RIBOSOMAL PROTEIN L30
    Polymer:23Type:polypeptide(L)Length:60
    Chains:X
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 4
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 5
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 6
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 7
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 8
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 9
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 10
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 11
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 12
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 13
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 14
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 15
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 16
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 17
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 18
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 19
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 20
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 21
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 22
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
    Polymer: 23
    Scientific Name: Thermus thermophilus Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    486D  7.5A model of 70S ribosome 
     
     
  •  
    Move Section Derived Data Hide
     
     
 
< Biological Assembly    Help
View in Jmol
Composite of PDB entries (1GIX and 1GIY)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Yusupov, M.M.,   Yusupova, G.Z.,   Baucom, A.,   Lieberman, K.,   Earnest, T.N.,   Cate, J.H.D.,   Noller, H.F.

    Deposition:   2001-03-30
    Release:   2001-05-04
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 5.50
    R-Value: n/a
    R-Free: n/a
    Space Group: I 4 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 507.20 α = 90.00 
    b = 507.20 β = 90.00 
    c = 803.66 γ = 90.00