Download MendeleyThe 2[4Fe-4S] Ferredoxins
Adman, E.T., Sieker, L.C.To be published.
1DUR
Replacement for 1FDX 2(4FE4S) ferredoxin from (NOW) Peptostreptococcus asaccharolyticus
- PDB DOI: https://doi.org/10.2210/pdb1DUR/pdb
- Entry: 1DUR supersedes: 1FDX
- Classification: ELECTRON TRANSPORT
- Organism(s): Peptoniphilus asaccharolyticus
- Mutation(s): No
- Deposited: 2000-01-18 Released: 2000-03-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Work: 0.155
- R-Value Observed: 0.140
wwPDB Validation 3D Report Full Report
This is version 1.6 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 2[4FE-4S] FERREDOXIN | 55 | Peptoniphilus asaccharolyticus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P00193 (Peptoniphilus asaccharolyticus) Explore P00193 Go to UniProtKB: P00193 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00193 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SF4 Query on SF4 | B [auth A], C [auth A] | IRON/SULFUR CLUSTER Fe4 S4 LJBDFODJNLIPKO-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Work: 0.155
- R-Value Observed: 0.140
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 30.52 | α = 90 |
| b = 37.75 | β = 90 |
| c = 39.37 | γ = 90 |
| Software Name | Purpose |
|---|---|
| X-PLOR | refinement |
| PICKER | data reduction |
Entry History
Deposition Data
- Released Date: 2000-03-29 Deposition Author(s): Adman, E.T., Sieker, L.C.
- This entry supersedes: 1FDX
Revision History (Full details and data files)
- Version 1.0: 2000-03-29
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2014-08-13
Changes: Non-polymer description - Version 1.4: 2017-10-04
Changes: Refinement description - Version 1.5: 2018-04-04
Changes: Data collection - Version 1.6: 2024-02-07
Changes: Data collection, Database references, Derived calculations
