1ZPL
E. coli F17a-G lectin domain complex with GlcNAc(beta1-O)Me
- PDB DOI: https://doi.org/10.2210/pdb1ZPL/pdb
- Classification: CELL ADHESION
- Organism(s): Escherichia coli
- Expression System: Escherichia coli
- Mutation(s): No 
- Deposited: 2005-05-17 Released: 2006-05-23 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.254 
- R-Value Work: 0.208 
- R-Value Observed: 0.212 
This is version 1.5 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
F17a-G | 177 | Escherichia coli | Mutation(s): 0  Gene Names: F17G AF022140 | ||
UniProt | |||||
Find proteins for Q99003 (Escherichia coli) Explore Q99003  Go to UniProtKB:  Q99003 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99003 | ||||
Sequence AnnotationsExpand | |||||
|
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MAG Query on MAG | C [auth A], D [auth B] | methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside C9 H17 N O6 ZEVOCXOZYFLVKN-JGKVKWKGSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.254 
- R-Value Work: 0.208 
- R-Value Observed: 0.212 
- Space Group: P 31 2 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 42.805 | α = 90 |
b = 42.805 | β = 90 |
c = 288.244 | γ = 120 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
AMoRE | phasing |
CNS | refinement |
Entry History 
Deposition Data
- Released Date: 2006-05-23  Deposition Author(s): Buts, L., Wellens, A., Van Molle, I., Wyns, L., Loris, R., Lahmann, M., Oscarson, S., De Greve, H., Bouckaert, J.
Revision History (Full details and data files)
- Version 1.0: 2006-05-23
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2011-10-05
Changes: Derived calculations - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.5: 2023-08-23
Changes: Data collection, Database references, Refinement description, Structure summary