Download MendeleyCrystal structure of yeast actin V159N mutant
Vorobiev, S.M., Belmont, L.D., Drubin, D.D., Almos, C.To be published.
1YVN
THE YEAST ACTIN VAL 159 ASN MUTANT COMPLEX WITH HUMAN GELSOLIN SEGMENT 1.
- PDB DOI: https://doi.org/10.2210/pdb1YVN/pdb
- Classification: STRUCTURAL PROTEIN
- Organism(s): Saccharomyces cerevisiae, Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 1999-03-23 Released: 2000-03-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.235
- R-Value Work: 0.187
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PROTEIN (ACTIN) | 375 | Saccharomyces cerevisiae | Mutation(s): 1 |  | |
UniProt | |||||
Find proteins for P60010 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P60010 Go to UniProtKB: P60010 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60010 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PROTEIN (GELSOLIN) | B [auth G] | 125 | Homo sapiens | Mutation(s): 0 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P06396 (Homo sapiens) Explore P06396 Go to UniProtKB: P06396 | |||||
PHAROS: P06396 GTEx: ENSG00000148180 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P06396 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP Query on ATP | E [auth A] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | ||
| SO4 Query on SO4 | D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| CA Query on CA | F [auth G] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| MG Query on MG | C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.235
- R-Value Work: 0.187
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 176.098 | α = 90 |
| b = 68.077 | β = 102.24 |
| c = 54.691 | γ = 90 |
| Software Name | Purpose |
|---|---|
| X-PLOR | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2000-03-23 Deposition Author(s): Vorobiev, S.M., Belmont, L.D., Drubin, D.G., Almo, S.C.
Revision History (Full details and data files)
- Version 1.0: 2000-03-23
Type: Initial release - Version 1.1: 2008-04-26
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2019-11-13
Changes: Database references - Version 1.4: 2023-08-23
Changes: Data collection, Database references, Derived calculations, Refinement description
