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RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans
 
 
DOI:10.2210/pdb1y69/pdb   NDB ID: RR0099
1Y69
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 1011898.08
     
    Molecule:23S ribosomal RNA
    Polymer:1Type:polyribonucleotideLength:2880
    Chains:0
    Molecule:5S ribosomal RNA
    Polymer:2Type:polyribonucleotideLength:124
    Chains:9
    Molecule:50S ribosomal protein L16
    Polymer:3Type:polypeptide(L)Length:141
    Chains:K
    Molecule:50S ribosomal protein L27
    Polymer:4Type:polypeptide(L)Length:91
    Chains:U
    Molecule:Ribosome recycling factor
    Polymer:5Type:polypeptide(L)Length:113
    Chains:8
    Fragment:RRF domain I
    Mutation:RRF domain II deletion and GGG insertion
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Deinococcus radiodurans Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Deinococcus radiodurans Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Deinococcus radiodurans Go to NCBI Taxonomy entry  
    Polymer: 4
    Scientific Name: Deinococcus radiodurans Go to NCBI Taxonomy entry  
    Polymer: 5
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1EK8  Natural E.coli RRF model 
    1NKW  Native 50S structure 
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Wilson, D.N.,   Schluenzen, F.,   Harms, J.M.,   Yoshida, T.,   Ohkubo, T.,   Albrecht, R.,   Buerger, J.,   Kobayashi, Y.,   Fucini, P.

    Deposition:   2004-12-04
    Release:   2005-03-01
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 3.33
    R-Value: 0.275 (obs.)
    R-Free: 0.338
    Space Group: I 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 168.70 α = 90.00 
    b = 405.00 β = 90.00 
    c = 693.00 γ = 90.00