1TI8
H7 Haemagglutinin
- PDB DOI: https://doi.org/10.2210/pdb1TI8/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Influenza A virus
- Mutation(s): No
- Deposited: 2004-06-02 Released: 2005-06-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.300
- R-Value Work: 0.230
- R-Value Observed: 0.230
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hemagglutinin | 314 | Influenza A virus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q6GYW3 (Influenza A virus) Explore Q6GYW3 Go to UniProtKB: Q6GYW3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6GYW3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| hemagglutinin | 172 | Influenza A virus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q701T7 (Influenza A virus) Explore Q701T7 Go to UniProtKB: Q701T7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q701T7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | I [auth A], J [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| NDG Query on NDG | C [auth A] | 2-acetamido-2-deoxy-alpha-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-PVFLNQBWSA-N |  | ||
| MAN Query on MAN | D [auth A], E [auth A], F [auth A], G [auth A], H [auth A] | alpha-D-mannopyranose C6 H12 O6 WQZGKKKJIJFFOK-PQMKYFCFSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.300
- R-Value Work: 0.230
- R-Value Observed: 0.230
- Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 118.2 | α = 90 |
| b = 118.2 | β = 90 |
| c = 298.7 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2005-06-21 Deposition Author(s): Russell, R.J., Gamblin, S.J., Haire, L.F., Stevens, D.J., Xaio, B., Ha, Y., Skehel, J.J.
Revision History (Full details and data files)
- Version 1.0: 2005-06-21
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Structure summary
