1O9W
F17-aG lectin domain from Escherichia coli in complex with N-acetyl-glucosamine
- PDB DOI: https://doi.org/10.2210/pdb1O9W/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Escherichia coli
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2002-12-20 Released: 2003-05-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.242
- R-Value Work: 0.211
- R-Value Observed: 0.211
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| F17A-G FIMBRIAL ADHESIN | 177 | Escherichia coli | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q99003 (Escherichia coli) Explore Q99003 Go to UniProtKB: Q99003 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q99003 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | B [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.242
- R-Value Work: 0.211
- R-Value Observed: 0.211
- Space Group: P 61 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.329 | α = 90 |
| b = 42.329 | β = 90 |
| c = 268.714 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-05-29 Deposition Author(s): Buts, L., De Genst, E., Loris, R., Oscarson, S., Lahmann, M., Messens, J., Brosens, E., Wyns, L., Bouckaert, J., De Greve, H.
Revision History (Full details and data files)
- Version 1.0: 2003-05-29
Type: Initial release - Version 1.1: 2012-01-18
Changes: Database references, Derived calculations, Non-polymer description, Other, Refinement description, Structure summary, Version format compliance - Version 1.2: 2019-07-24
Changes: Advisory, Data collection - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Other, Structure summary - Version 1.4: 2023-12-13
Changes: Advisory, Data collection, Database references, Refinement description, Structure summary
