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Crystal Structure of Antithrombin in the Pentasaccharide-Bound Intermediate State
1NQ9
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Blood Clotting
    Structure Weight: 103241.39
    Molecule: Antithrombin-III
    Polymer: 1 Type: protein Length: 432
    Chains: I, L
    Details: alpha glycoform
    Organism: Homo sapiens
    Gene Names: Gene View for SERPINC1 AT3 PRO0309
    UniProtKB: Protein Feature View | Search PDB | P01008  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human  
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1E03   
    1E04   
    1E05   
    1OYH   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NTP
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    NTP C36 H60 O55 S9
    HEPARIN PENTASACCHARIDE
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Huntington, J.A.,  Johnson, D.J.D.

    Deposition:   2003-01-21
    Release:   2003-09-30
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
    2011-07-13
    Non-polymer description
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.60
    R-Value: 0.209 (work)
    R-Free: 0.250
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 69.68 α = 90.00 
    b = 86.76 β = 109.54 
    c = 96.92 γ = 90.00