Download MendeleyNortheast Structural Genomics Consortium Target LkR164
Kuzin, A., Su, M., Lew, S., Seetharaman, J., Patel, P., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L.To be published.
3OWQ
X-Ray Structure of Lin1025 protein from Listeria innocua, Northeast Structural Genomics Consortium Target LkR164
- PDB DOI: https://doi.org/10.2210/pdb3OWQ/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Listeria innocua
- Mutation(s): No
- Deposited: 2010-09-20 Released: 2010-10-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.61 Å
- R-Value Free: 0.260
- R-Value Work: 0.225
- R-Value Observed: 0.227
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Lin1025 protein | 321 | Listeria innocua | Mutation(s): 0 Gene Names: lin1025 |  | |
UniProt | |||||
Find proteins for Q92CZ6 (Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)) Explore Q92CZ6 Go to UniProtKB: Q92CZ6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q92CZ6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | E [auth B], F [auth C], G [auth D] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.61 Å
- R-Value Free: 0.260
- R-Value Work: 0.225
- R-Value Observed: 0.227
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 56.51 | α = 90 |
| b = 157.041 | β = 98.38 |
| c = 57.277 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| ADSC | data collection |
| HKL-2000 | data reduction |
| SCALA | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2010-10-20 Deposition Author(s): Kuzin, A., Su, M., Lew, S., Seetharaman, J., Patel, P., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2010-10-20
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2012-02-22
Changes: Structure summary
