Download MendeleyCryptosporidium parvum cyclin-dependent kinase cgd5_2510 with ADP bound.
Wernimont, A.K., Dong, A., Lew, J., Lin, Y.H., Hassanali, A., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Bochkarev, A., Hui, R., Artz, J.D.To be published.
3NIZ
Cryptosporidium parvum cyclin-dependent kinase cgd5_2510 with ADP bound.
- PDB DOI: https://doi.org/10.2210/pdb3NIZ/pdb
- Classification: TRANSFERASE
- Organism(s): Cryptosporidium parvum Iowa II
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-06-16 Released: 2010-07-28
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.256
- R-Value Work: 0.221
- R-Value Observed: 0.223
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Rhodanese family protein | 311 | Cryptosporidium parvum Iowa II | Mutation(s): 0 Gene Names: CGD5_2510 |  | |
UniProt | |||||
Find proteins for Q5CRJ8 (Cryptosporidium parvum (strain Iowa II)) Explore Q5CRJ8 Go to UniProtKB: Q5CRJ8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5CRJ8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP Query on ADP | D [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N |  | ||
| MG Query on MG | B [auth A], C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.256
- R-Value Work: 0.221
- R-Value Observed: 0.223
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 64.337 | α = 90 |
| b = 64.337 | β = 90 |
| c = 200.039 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| BUSTER | refinement |
Entry History
Deposition Data
- Released Date: 2010-07-28 Deposition Author(s): Wernimont, A.K., Dong, A., Lew, J., Lin, Y.H., Hassanali, A., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Bochkarev, A., Hui, R., Artz, J.D., Structural Genomics Consortium (SGC)
Revision History (Full details and data files)
- Version 1.0: 2010-07-28
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2011-11-02
Changes: Source and taxonomy - Version 1.3: 2017-11-08
Changes: Refinement description - Version 1.4: 2024-02-21
Changes: Data collection, Database references, Derived calculations
