Download MendeleyCrystal structure of the V-type ATP synthase subunit F from Archaeoglobus fulgidus
Vorobiev, S.M., Su, M., Seetharaman, J., Zhao, L., Fang, Y., Cunningham, K., Ma, L.-C., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L.To be published.
2I4R
Crystal structure of the V-type ATP synthase subunit F from Archaeoglobus fulgidus. NESG target GR52A.
- PDB DOI: https://doi.org/10.2210/pdb2I4R/pdb
- Classification: HYDROLASE
- Organism(s): Archaeoglobus fulgidus
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-08-22 Released: 2006-08-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.255
- R-Value Work: 0.227
- R-Value Observed: 0.227
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| V-type ATP synthase subunit F | 102 | Archaeoglobus fulgidus | Mutation(s): 2 Gene Names: atpF EC: 3.6.3.14 |  | |
UniProt | |||||
Find proteins for O29102 (Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)) Explore O29102 Go to UniProtKB: O29102 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O29102 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.255
- R-Value Work: 0.227
- R-Value Observed: 0.227
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 47.398 | α = 90 |
| b = 77.827 | β = 90 |
| c = 117.786 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| SHELXE | model building |
| SOLVE | phasing |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2006-08-29 Deposition Author(s): Vorobiev, S.M., Su, M., Seetharaman, J., Zhao, L., Fang, Y., Cunningham, K., Ma, L.-C., Xiao, R., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2006-08-29
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance
