Download MendeleyCrystal structure of YDCK from Salmonella cholerae NESG target SCR6.
Benach, J., Chen, Y., Vorobiev, S.M., Seetharaman, J., Rong, X., Montelione, G.T., Tong, L.To be published.
2F9C
Crystal structure of YDCK from Salmonella cholerae. NESG target SCR6
- PDB DOI: https://doi.org/10.2210/pdb2F9C/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Salmonella enterica
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2005-12-05 Released: 2005-12-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.323
- R-Value Work: 0.253
- R-Value Observed: 0.253
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein YDCK | 334 | Salmonella enterica | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A0A0H2WQ05 (Salmonella paratyphi A (strain ATCC 9150 / SARB42)) Explore A0A0H2WQ05 Go to UniProtKB: A0A0H2WQ05 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H2WQ05 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CS Query on CS | C [auth A] D [auth A] E [auth A] F [auth B] G [auth B] | CESIUM ION Cs NCMHKCKGHRPLCM-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.323
- R-Value Work: 0.253
- R-Value Observed: 0.253
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 104.602 | α = 90 |
| b = 104.602 | β = 90 |
| c = 162.423 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| SHELX | model building |
| SOLVE | phasing |
| RESOLVE | model building |
| CNS | refinement |
| SHELX | phasing |
| RESOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2005-12-20 Deposition Author(s): Benach, J., Chen, Y., Vorobiev, S.M., Seetharaman, J., Janjua, H., Cooper, B., Acton, X.T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2005-12-20
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2024-02-14
Changes: Data collection, Database references, Derived calculations
