Download MendeleyX-ray structure of hypothetical protein SPYM3_0169 from Streptococcus pyogenes
Kuzin, A., Lee, I., Edstrom, W., Xiao, R., Acton, T., Rost, B., Montelione, G., Hunt, J., Tong, L.To be published.
1PG6
X-Ray Crystal Structure of Protein SPYM3_0169 from Streptococcus pyogenes. Northeast Structural Genomics Consortium Target DR2.
- PDB DOI: https://doi.org/10.2210/pdb1PG6/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Streptococcus pyogenes MGAS8232
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2003-05-27 Released: 2003-12-02
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.244
- R-Value Work: 0.213
- R-Value Observed: 0.213
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein SpyM3_0169 | 243 | Streptococcus pyogenes MGAS8232 | Mutation(s): 11 Gene Names: SPS0176 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CA Query on CA | B [auth A], C [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.244
- R-Value Work: 0.213
- R-Value Observed: 0.213
- Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.541 | α = 90 |
| b = 71.541 | β = 90 |
| c = 216.927 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| CNS | refinement |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-12-02 Deposition Author(s): Kuzin, A., Lee, I., Edstrom, W., Xiao, R., Acton, T., Rost, B., Montelione, G., Hunt, J., Tong, L., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2003-12-02
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance
