The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome A DOI:10.2210/pdb3u5d/pdb   NDB ID: NA1421

3U5D   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 3U5B   3U5C   3U5D   3U5E   3U5F   3U5G   3U5H   3U5I     Download All Files      Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ribosome Structure Weight: 1339386.52 Molecule: 25S rRNA Polymer: 1 Type: rna Length: 3396 Chains: 1 Organism Saccharomyces cerevisiae Molecule: 5S rRNA Polymer: 2 Type: rna Length: 121 Chains: 3 Organism Saccharomyces cerevisiae Molecule: 5.8S rRNA Polymer: 3 Type: rna Length: 158 Chains: 4 Organism Saccharomyces cerevisiae     Source Hide Polymer: 1 Scientific Name: Saccharomyces cerevisiae   Taxonomy     Polymer: 2 Scientific Name: Saccharomyces cerevisiae   Taxonomy     Polymer: 3 Scientific Name: Saccharomyces cerevisiae   Taxonomy         Ligand Chemical Component Hide Identifier Formula Name Interactions MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer OHX Search  Download  H12 N6 Os osmium (III) hexammine   Ligand Explorer     Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: NA1421     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Ben-Shem, A.,  Garreau de Loubresse, N.,  Melnikov, S.,  Jenner, L.,  Yusupova, G.,  Yusupov, M. Deposition:   2011-10-11 Release:   2011-12-21 Last Modified (REVDAT):   2012-05-16     Revision History    Hide Mouse over text for details 2012-05-16 Polymer description 2012-01-25 Other 2012-01-25 Entry title     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   3.00 R-Value: 0.182 (obs.) R-Free: 0.228 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 436.43 α = 90.00  b = 288.22 β = 98.99  c = 305.08 γ = 90.00      Molecule of the Month Hide Ricin