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Crystal structure of the ankyrin repeat domain of TRPV1
 
 
DOI:10.2210/pdb2nyj/pdb
2NYJ
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Transport Protein
    Structure Weight: 30946.68
     
    Molecule:Transient receptor potential cation channel subfamily V member 1
    Polymer:1Type:polypeptide(L)Length:273
    Chains:A
    Fragment:ankyrin repeart domain, residues 101-365
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Rattus norvegicus Go to NCBI Taxonomy entry Common Name: Norway rat Expression System: Escherichia coli bl21(de3)  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    ATP     ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 3DLigand Explorer Link out to Ligand Expos:ATP Link out to SuperLigands:ATP Link out to SuperHapten:ATP
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    MSE SELENOMETHIONINE (parent: MET)(type: lPeptideLinking) C5 H11 N O2 Se 3D Ligand Explorer Link out to Ligand Expos:MSE Link out to SuperLigands:MSE Link out to SuperHapten:MSE 2D
     
     
  •  
    Move Section Derived Data Hide
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Jin, X.,   Gaudet, R.

    Deposition:   2006-11-20
    Release:   2007-07-03
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 3.20
    R-Value: 0.240 (obs.)
    R-Free: 0.286
    Space Group: P 3 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 124.72 α = 90.00 
    b = 124.72 β = 90.00 
    c = 62.77 γ = 120.00