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Crystal structure of yeast mitochondrial F1-ATPase
2HLD
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 1119284.71
    Molecule: ATP synthase alpha chain, mitochondrial
    Polymer: 1 Type: protein Length: 510
    Chains: A, B, C, J, K, L, S, T, U
    EC#: 3.6.3.14   
    Organism Saccharomyces cerevisiae
    Gene Names ATP1 YBL099W YBL0827
    UniProtKB:   Protein Feature View | Search PDB | P07251  
    Molecule: ATP synthase beta chain, mitochondrial
    Polymer: 2 Type: protein Length: 478
    Chains: D, E, F, M, N, O, V, W, X
    EC#: 3.6.3.14   
    Organism Saccharomyces cerevisiae
    Gene Names ATP2 YJR121W J2041
    UniProtKB:   Protein Feature View | Search PDB | P00830  
    Molecule: ATP synthase gamma chain, mitochondrial
    Polymer: 3 Type: protein Length: 278
    Chains: G, P, Y
    EC#: 3.6.3.14   
    Organism Saccharomyces cerevisiae
    Gene Names ATP3 ATP3a ATP3b YBR039W YBR0408
    UniProtKB:   Protein Feature View | Search PDB | P38077  
    Molecule: ATP synthase delta chain, mitochondrial
    Polymer: 4 Type: protein Length: 138
    Chains: H, Q, Z
    EC#: 3.6.3.14   
    Organism Saccharomyces cerevisiae
    Gene Names ATP16 YDL004W D2935 YD8119.03
    UniProtKB:   Protein Feature View | Search PDB | Q12165  
    Molecule: ATP synthase epsilon chain, mitochondrial
    Polymer: 5 Type: protein Length: 61
    Chains: 1, I, R
    EC#: 3.6.3.14   
    Organism Saccharomyces cerevisiae
    Gene Names ATP15 YPL271W P0345
    UniProtKB:   Protein Feature View | Search PDB | P21306  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Saccharomyces cerevisiae  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 4
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 5
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    ANP
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    Download      		ANP C10 H17 N6 O12 P3
    PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
    MG
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    Download      		MG Mg
    MAGNESIUM ION
    PO4
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    Download      		PO4 O4 P
    PHOSPHATE ION
     
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Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Kabaleeswaran, V.,  Puri, N.,  Walker, J.E.,  Leslie, A.G.,  Mueller, D.M.

    Deposition:   2006-07-06
    Release:   2006-11-28
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Flag residual B-value
    2011-07-13
    Refinement description
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.80
    R-Value: 0.207 (obs.)
    R-Free: 0.244
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 111.52 α = 90.00 
    b = 294.13 β = 101.67 
    c = 190.43 γ = 90.00