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Crystal Structure of UP1 Complexed With d(TTAGGGTT 7DA GGG); A Human Telomeric Repeat Containing 7-deaza-adenine
DOI:10.2210/pdb1u1k/pdb   NDB ID: PD0567
1U1K
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Transport Protein/dna
    Structure Weight: 25771.61
    Molecule: 5'-D(*TP*AP*GP*GP*GP*TP*TP*(7DA)P*GP*GP*G)-3'
    Polymer: 1 Type: dna Length: 11
    Chains: B
    Molecule: Heterogeneous nuclear ribonucleoprotein A1
    Polymer: 2 Type: protein Length: 196
    Chains: A
    Organism Homo sapiens
    Gene Names HNRNPA1 HNRPA1
    UniProtKB:   Protein Feature View | Search PDB | P09651  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
     
  •   Related PDB Entries Hide
    Identifier Details
    1PGZ  Crystal Structure Of UP1 Complexed With d(TTAGGGTTAG(6-Mi)G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-Deoxy--Ribofuranosyl)Isoxanthopteridine (6-Mi) 
    1PO6  Crystal Structure Of UP1 Complexed With d(TTAGG(6MI)TTAGGG); A Human Telomeric Repeat Containing 6-Methyl-8-(2-Deoxy--Ribofuranosyl)Isoxanthopteridine (6-Mi) 
    1u1l   
    1u1m   
    1u1n   
    1u1o   
    1u1p   
    1u1q   
    1u1r   
    2UP1  Structure Of Up1-Telomeric DNA Complex 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    7DA
    Search      		7DA C11 H15 N4 O6 P DA dnaLinking
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0567
     
 
Data in orange boxes are gathered from external resources (when available).
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  •   Deposition Summary Hide
    Authors:   Myers, J.C.,  Shamoo, Y.

    Deposition:   2004-07-15
    Release:   2004-09-21
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.234 (obs.)
    R-Free: 0.270
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 51.80 α = 90.00 
    b = 51.80 β = 90.00 
    c = 171.07 γ = 90.00