POP-OUT | CLOSE
MyPDB Login - Username: Password:

About: MyPDB stores and automatically runs your favorite queries. Email alerts are sent when matching structures are found.

    MyPDB Login
MyPDB: Login | Register
RCSB PDB Protein Data Bank | Home A Member of the wwPDB

An Information Portal to Biological Macromolecular Structures

As of Tuesday Feb 02, 2010 at 4 PM PST there are 63093 Structures RSS Feed for the Latest Released Structures Help | Latest Released  |  PDB Statistics Help | PDB Statistics
RCSB PDB Protein Data Bank | Home

Print Options: BW Safe Color Safe Print




URL:
 
 
YEAST CYTOCHROME BC1 COMPLEX
 
 
DOI:10.2210/pdb1kb9/pdb
1KB9
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Oxidoreductase/electron Transport
    Structure Weight: 252225.56
     
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I
    Polymer:1Type:polypeptide(L)Length:431
    Chains:A
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 27-457
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2
    Polymer:2Type:polypeptide(L)Length:352
    Chains:B
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 17-368
    Molecule:CYTOCHROME B
    Polymer:3Type:polypeptide(L)Length:385
    Chains:C
    Molecule:CYTOCHROME C1, HEME PROTEIN
    Polymer:4Type:polypeptide(L)Length:246
    Chains:D
    Fragment:RESIDUES 62-307
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT
    Polymer:5Type:polypeptide(L)Length:185
    Chains:E
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 31-215
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN
    Polymer:6Type:polypeptide(L)Length:74
    Chains:F
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 74-147
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN
    Polymer:7Type:polypeptide(L)Length:125
    Chains:G
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 3-127
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C
    Polymer:8Type:polypeptide(L)Length:93
    Chains:H
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 2-94
    Molecule:UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN
    Polymer:9Type:polypeptide(L)Length:55
    Chains:I
    EC#:1.10.2.2 Go to IUBMB EC entry  
    Fragment:RESIDUES 4-58
    Molecule:HEAVY CHAIN (VH) OF FV-FRAGMENT
    Polymer:10Type:polypeptide(L)Length:127
    Chains:J
    Molecule:LIGHT CHAIN (VL) OF FV-FRAGMENT
    Polymer:11Type:polypeptide(L)Length:107
    Chains:K
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 4
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 5
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 6
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 7
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 8
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 9
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 10
    Scientific Name: Mus musculus Go to NCBI Taxonomy entry Common Name: House mouse Expression System: Escherichia coli  
    Polymer: 11
    Scientific Name: Mus musculus Go to NCBI Taxonomy entry Common Name: House mouse Expression System: Escherichia coli  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1EZV  STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO- CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    CDL     CARDIOLIPIN C81 H156 O17 P2 3DLigand Explorer Link out to Ligand Expos:CDL Link out to SuperLigands:CDL Link out to SuperHapten:CDL
    FES     FE2/S2 (INORGANIC) CLUSTER Fe2 S2 3DLigand Explorer Link out to Ligand Expos:FES Link out to SuperLigands:FES Link out to SuperHapten:FES
    HEM     PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 3DLigand Explorer Link out to Ligand Expos:HEM Link out to SuperLigands:HEM Link out to SuperHapten:HEM
    PCF     1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE C40 H80 N O8 P 3DLigand Explorer Link out to Ligand Expos:PCF Link out to SuperLigands:PCF Link out to SuperHapten:PCF
    PEF     DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE C37 H74 N O8 P 3DLigand Explorer Link out to Ligand Expos:PEF Link out to SuperLigands:PEF Link out to SuperHapten:PEF
    PIE     1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL C43 H80 O13 P 3DLigand Explorer Link out to Ligand Expos:PIE Link out to SuperLigands:PIE Link out to SuperHapten:PIE
    SMA     STIGMATELLIN A C30 H42 O7 3DLigand Explorer Link out to Ligand Expos:SMA Link out to SuperLigands:SMA Link out to SuperHapten:SMA
    UMQ     UNDECYL-MALTOSIDE C23 H44 O11 3DLigand Explorer Link out to Ligand Expos:UMQ Link out to SuperLigands:UMQ Link out to SuperHapten:UMQ
    UQ6     5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22- HEXAENYL)-2,3-DIMETHOXY
    -6-METHYL-BENZENE- 1,4-DIOL
    C39 H60 O4 3DLigand Explorer Link out to Ligand Expos:UQ6 Link out to SuperLigands:UQ6 Link out to SuperHapten:UQ6
     
     
  •  
    Move Section Derived Data Hide
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Lange, C.,   Nett, J.H.,   Trumpower, B.L.,   Hunte, C.

    Deposition:   2001-11-05
    Release:   2002-09-18
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.30
    R-Value: 0.218 (work)
    R-Free: 0.249
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 214.47 α = 90.00 
    b = 163.92 β = 117.50 
    c = 147.28 γ = 90.00