1FIW
THREE-DIMENSIONAL STRUCTURE OF BETA-ACROSIN FROM RAM SPERMATOZOA
- PDB DOI: https://doi.org/10.2210/pdb1FIW/pdb
- Classification: HYDROLASE
- Organism(s): Ovis aries
- Mutation(s): No
- Deposited: 2000-08-07 Released: 2000-11-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.242
- R-Value Work: 0.197
- R-Value Observed: 0.200
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| BETA-ACROSIN HEAVY CHAIN | 290 | Ovis aries | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q9GL10 (Ovis aries) Explore Q9GL10 Go to UniProtKB: Q9GL10 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9GL10 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| BETA-ACROSIN LIGHT CHAIN | B [auth L] | 22 | Ovis aries | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for Q9GL10 (Ovis aries) Explore Q9GL10 Go to UniProtKB: Q9GL10 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9GL10 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Oligosaccharides
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
| alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | C [auth B] | 5 |  | N-Glycosylation | |
Glycosylation Resources | |||||
GlyTouCan: G27690IM GlyCosmos: G27690IM GlyGen: G27690IM | |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PBZ Query on PBZ | D [auth A], E [auth A] | P-AMINO BENZAMIDINE C7 H10 N3 WPANETAWYGDRLL-UHFFFAOYSA-O |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.242
- R-Value Work: 0.197
- R-Value Observed: 0.200
- Space Group: P 65 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 105.288 | α = 90 |
| b = 105.288 | β = 90 |
| c = 120.835 | γ = 120 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
| REFMAC | refinement |
Entry History
Deposition Data
- Released Date: 2000-11-08 Deposition Author(s): Tranter, R., Read, J.A., Jones, R., Brady, R.L.
Revision History (Full details and data files)
- Version 1.0: 2000-11-08
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2018-01-31
Changes: Advisory, Experimental preparation - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Structure summary
