PDA: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID

PDA is a Ligand Of Interest in 5G2Q designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5G2Q_PDA_H_1000 74% 11% 0.14 0.9722.56 1.68 2 400100%1
5G2Q_PDA_F_1000 66% 13% 0.157 0.9642.6 1.44 2 240100%1
5G2Q_PDA_C_1000 62% 15% 0.163 0.9572.38 1.43 3 430100%1
5G2Q_PDA_B_1000 62% 15% 0.185 0.9782.22 1.59 3 730100%1
5G2Q_PDA_A_1000 61% 17% 0.179 0.9682.34 1.32 2 320100%1
5G2Q_PDA_E_1000 60% 14% 0.17 0.9552.47 1.43 2 300100%1
5G2Q_PDA_G_1000 59% 15% 0.19 0.9742.27 1.51 3 500100%1
5G2Q_PDA_I_1000 58% 12% 0.174 0.9552.4 1.64 2 620100%1
5G2Q_PDA_D_1000 54% 14% 0.199 0.9652.21 1.69 3 630100%1
5G2Q_PDA_K_1000 41% 16% 0.216 0.9322.29 1.43 2 420100%1
5G2Q_PDA_J_1000 35% 18% 0.223 0.9132.3 1.27 2 110100%1
5G2Q_PDA_L_1000 34% 12% 0.239 0.9252.63 1.53 3 400100%1
8H21_PDA_A_407 87% 12% 0.093 0.9662.19 1.89 3 310100%1
1ELU_PDA_A_400 72% 1% 0.122 0.9464.9 2.99 11 1261100%1
2Q3D_PDA_A_311 68% 20% 0.17 0.9821.73 1.64 3 311100%1
6KG1_PDA_A_503 42% 2% 0.251 0.9713.64 2.91 6 980100%1
5XT6_PDA_B_501 34% 10% 0.246 0.9313.09 1.31 3 530100%1