RIB: alpha-D-ribofuranose
RIB is a Ligand Of Interest in 4XDA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4XDA_RIB_A_401 | 80% | 36% | 0.103 | 0.952 | 1.07 | 1.54 | 1 | 2 | 0 | 0 | 100% | 1 |
4XDA_RIB_C_401 | 77% | 48% | 0.106 | 0.946 | 0.96 | 1.06 | 1 | 1 | 0 | 0 | 100% | 1 |
4XDA_RIB_D_401 | 30% | 32% | 0.182 | 0.845 | 1.14 | 1.65 | 1 | 3 | 0 | 0 | 100% | 1 |
4XCK_RIB_A_401 | 46% | 39% | 0.227 | 0.964 | 1.14 | 1.29 | 1 | 2 | 1 | 0 | 100% | 1 |
1RK2_RIB_B_311 | 96% | 55% | 0.064 | 0.974 | 0.84 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
3GO6_RIB_A_305 | 93% | 44% | 0.08 | 0.977 | 0.7 | 1.48 | - | 2 | 0 | 0 | 100% | 1 |
6WK0_RIB_B_401 | 91% | 29% | 0.078 | 0.964 | 0.76 | 2.2 | - | 2 | 1 | 0 | 100% | 1 |
1YOE_RIB_A_2001 | 88% | 51% | 0.092 | 0.968 | 0.4 | 1.47 | - | 3 | 0 | 0 | 100% | 0.35 |
1GQT_RIB_D_1310 | 87% | 45% | 0.087 | 0.96 | 0.79 | 1.38 | - | 2 | 0 | 0 | 100% | 1 |