UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 1Y6G designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1Y6G_UDP_B_2021 | 47% | 67% | 0.216 | 0.957 | 0.65 | 0.62 | - | 1 | 1 | 0 | 100% | 1 |
| 1Y6G_UDP_A_1404 | 40% | 69% | 0.236 | 0.948 | 0.61 | 0.58 | - | 1 | 1 | 0 | 100% | 1 |
| 1XV5_UDP_A_1402 | 96% | 44% | 0.063 | 0.974 | 1.11 | 1.09 | 1 | 2 | 1 | 0 | 100% | 1 |
| 1Y8Z_UDP_B_2001 | 94% | 69% | 0.074 | 0.973 | 0.58 | 0.58 | - | 1 | 1 | 0 | 100% | 1 |
| 1YA6_UDP_A_2001 | 94% | 70% | 0.083 | 0.982 | 0.57 | 0.58 | - | 1 | 0 | 0 | 100% | 1 |
| 1Y6F_UDP_B_601 | 90% | 67% | 0.098 | 0.982 | 0.58 | 0.67 | - | 1 | 1 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
