7TZ8

Solution NMR structure of the PBS linker polypeptide domain (fragment 254-400) of phycobilisome linker protein ApcE from Synechocystis sp. PCC 6803 refined with NH RDCs. Northeast Structural Genomics Consortium Target SgR209C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
11D 1H20 mM MES, 100 mM sodium chloride, 5 mM calcium chloride, 100 mM DTT, 0.02 % sodium azide, 1.4 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O200 mM6.51 atm293Bruker AVANCE III 850
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III850
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS water refinementCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (medoid)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS1.3Brunger, Adams, Clore, Gros, Nilges and Read
2structure calculationCYANA3.98.14Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRFAM-SPARKY1.370Lee, Westler, Bahrami, Eghbalnia, Markley
4data analysisPdbStat5.21.6Tejero, Snyder, Mao, Aramini, Montelione
5peak pickingNMRFAM-SPARKY1.370Lee, Westler, Bahrami, Eghbalnia, Markley