7A2D

Structure-function analyses of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localisation to the cell division site


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
143D HCCH-TOCSY1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
23D HN(CO)CA1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
33D HNCA1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
43D CBCA(CO)NH1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
53D HNCACB1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
63D HNCO1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
73D HN(CA)CO1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
83D HCCH-TOCSY1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
103D 1H-13C NOESY-HSQC ALIPHATIC1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
113D 1H-13C NOESY-HSQC AROMATIC1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
123D 1H-15N NOESY-HSQC1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
13H(C)CONH1.5 mM [U-13C; U-15N] DolP, 50 mM NA sodium phosphate, 0.02 % w/v NA NaN3, 50 mM NA sodium chloride90% H2O/10% D2O0.05 M6AMBIENT bar298Varian INOVA 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsTHE STRUCTURE WAS CALCULATED USING TRADITIONAL NOE AND DEHEDRAL ANGLE RESTRAINTS
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA2.3LINGE
11chemical shift assignmentNMRFAM-SPARKYLee W, Tonelli M, Markley JL
13data analysisNMRFAM-SPARKYLee W, Tonelli M, Markley JL
12structure calculationCYANAGuntert, Mumenthaler and Wuthrich
2refinementPROCHECK / PROCHECK-NMRLaskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton
3refinementCYANA2.1LASKOWSKI AND MACARTHUR (PROCHECKNMR)
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7data analysisTALOSCornilescu, Delaglio and Bax