6I3R

Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1/2 of Drosophila helicase MLE


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
23D HCCH-TOCSY0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
33D HNCACB0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
43D HNCA0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
53D CBCA(CO)NH0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
63D 1H-13C NOESY aliphatic0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
73D H(CCO)NH0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
83D HNCO0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
93D HBHA(CO)NH0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
103D 1H-15N NOESY0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
112D 1H-13C HSQC aromatic0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 800
123D 1H-13C NOESY aromatic0.5 mM [U-13C; U-15N] MLE dsRBD1,290% H2O/10% D2O200 mM61 bar298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
3BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCcpNmr AnalysisCCPN
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3refinementARIALinge, O'Donoghue and Nilges