4O42

Tandem chromodomains of human CHD1 in complex with influenza NS1 C-terminal tail dimethylated at K229


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1729115% PEG3350, 0.1 succinic acid, pH 7, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.856.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 110.068α = 90
b = 46.057β = 90
c = 46.4γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRIGAKU SATURN A2002012-07-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU FR-E1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8746.061000.08713.37.120229
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.871.911000.0121.67.31276

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2B2W1.8746.062018899799.960.19050.18890.221RANDOM41.1586
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.231.810.43
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.619
r_dihedral_angle_4_deg25.059
r_dihedral_angle_3_deg12.059
r_dihedral_angle_1_deg5.813
r_mcangle_it3.505
r_mcbond_it2.596
r_mcbond_other2.578
r_angle_refined_deg1.511
r_angle_other_deg0.836
r_chiral_restr0.097
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.619
r_dihedral_angle_4_deg25.059
r_dihedral_angle_3_deg12.059
r_dihedral_angle_1_deg5.813
r_mcangle_it3.505
r_mcbond_it2.596
r_mcbond_other2.578
r_angle_refined_deg1.511
r_angle_other_deg0.836
r_chiral_restr0.097
r_bond_refined_d0.014
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1415
Nucleic Acid Atoms
Solvent Atoms96
Heterogen Atoms17

Software

Software
Software NamePurpose
Aimlessdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction