X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.529320% PEG3350, 0.2 M Lithium chloride, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.754.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 176.82α = 90
b = 176.82β = 90
c = 56.47γ = 120
Symmetry
Space GroupP 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray77CCDADSC QUANTUM 3152009-01-23MSINGLE WAVELENGTH
21x-ray77CCDADSC QUANTUM 3152009-01-23MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I020.978DiamondI02
2SYNCHROTRONDIAMOND BEAMLINE I021.84550,1.84470,1.30510DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.782153.193980.0730.07416.45.618462918462924
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.7821.81980.3930.4084.25.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.795153.18184629174753925399.710.178660.177730.19638RANDOM36.489
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
14.9314.93-29.86
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.771
r_dihedral_angle_4_deg19.72
r_dihedral_angle_3_deg13.272
r_scangle_it6.094
r_dihedral_angle_1_deg5.508
r_scbond_it4.145
r_mcangle_it2.568
r_mcbond_it1.62
r_angle_refined_deg1.395
r_chiral_restr0.093
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.771
r_dihedral_angle_4_deg19.72
r_dihedral_angle_3_deg13.272
r_scangle_it6.094
r_dihedral_angle_1_deg5.508
r_scbond_it4.145
r_mcangle_it2.568
r_mcbond_it1.62
r_angle_refined_deg1.395
r_chiral_restr0.093
r_bond_refined_d0.013
r_gen_planes_refined0.007
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms11993
Nucleic Acid Atoms
Solvent Atoms475
Heterogen Atoms3

Software

Software
Software NamePurpose
MOSFLMdata reduction
SOLVEphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling