2RNK

NMR structure of the domain 513-651 of the SARS-CoV nonstructural protein nsp3


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.2 mM [U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
22D 1H-13C HSQC1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
33D HNCA1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
43D HNCACB1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
53D CBCA(CO)NH1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
63D HNCO1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
73D HCCH-TOCSY1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
83D HCCH-COSY1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
93D C(CO)NH1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
103D H(CCO)NH1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
113D 1H-15N TOCSY1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
123D 1H-15N NOESY1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
133D 1H-13C NOESY aliphatic region1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
143D 1H-13C NOESY aromatic region1.2 mM [U-99% 13C; U-98% 15N] nsp3(513-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O90% H2O/10% D2O0.2276.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model12 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionCYANA1.3Bruker Biospin
2processingCYANA1.3Bruker Biospin
3data analysisCARAKeller and Wuthrich
4chemical shift assignmentCARAKeller and Wuthrich
5peak pickingCARAKeller and Wuthrich
6creating chemical shift listCYANA1.2Guntert, Mumenthaler and Wuthrich
7refinementCYANA1.2Guntert, Mumenthaler and Wuthrich