2N0Y

NMR structure of the complex between the C-terminal domain of the Rift Valley fever virus protein NSs and the PH domain of the Tfb1 subunit of TFIIH


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-15N] RNA polymerase II transcription factor B subunit 1, 1 mM Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
22D 1H-15N HSQC0.4 mM RNA polymerase II transcription factor B subunit 1, 0.2 mM [U-15N] Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
33D HCCH-TOCSY1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
43D HCCH-TOCSY1 mM RNA polymerase II transcription factor B subunit 1, 0.5 mM [U-13C; U-15N] Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
53D HNCO1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
63D HNCO1 mM RNA polymerase II transcription factor B subunit 1, 0.5 mM [U-13C; U-15N] Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
73D HNCACB1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
83D HNCACB1 mM RNA polymerase II transcription factor B subunit 1, 0.5 mM [U-13C; U-15N] Non-structural protein NS-S90% H2O/10% D2O06.5ambient300
92D 1H-13C HSQC1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S100% D2O06.5ambient300
102D 1H-13C HSQC0.5 mM RNA polymerase II transcription factor B subunit 1, 1 mM [U-13C; U-15N] Non-structural protein NS-S100% D2O06.5ambient300
113D 1H-13C NOESY1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S100% D2O06.5ambient300
123D 1H-13C NOESY0.5 mM RNA polymerase II transcription factor B subunit 1, 1 mM [U-13C; U-15N] Non-structural protein NS-S100% D2O06.5ambient300
133D 1H-13C NOESY aromatic1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S100% D2O06.5ambient300
143D 1H-13C NOESY aromatic0.5 mM RNA polymerase II transcription factor B subunit 1, 1 mM [U-13C; U-15N] Non-structural protein NS-S100% D2O06.5ambient300
152D 1H-13C HSQC aromatic1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S100% D2O06.5ambient300
162D 1H-13C HSQC aromatic0.5 mM RNA polymerase II transcription factor B subunit 1, 1 mM [U-13C; U-15N] Non-structural protein NS-S100% D2O06.5ambient300
173D 1H-13C NOESY intermolecular1 mM [U-13C; U-15N] RNA polymerase II transcription factor B subunit 1, 2 mM Non-structural protein NS-S100% D2O06.5ambient300
183D 1H-13C NOESY intermolecular0.5 mM RNA polymerase II transcription factor B subunit 1, 1 mM [U-13C; U-15N] Non-structural protein NS-S100% D2O06.5ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCcpNmr Analysis
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number260
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisCcpNmr Analysis2.3.1
2refinementCNS