2LAF

NMR solution structure of the N-terminal domain of the E. coli lipoprotein BamC


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
23D 1H-13C NOESY50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT100% D2O0.26.6ambient303
33D 1H-15N NOESY50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
43D HNCACB50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
53D CBCA(CO)NH50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
63D HNCO50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
73D HNHAHB50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
83D H(CCO)NH50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
93D HBHA(CO)NH50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
103D HCCH-TOCSY50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
113D H(CCO)NH50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
123D HN(CA)CO50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
132D 1H-15N HSQC IPAP50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT, 21 mg/ml Pf1 phage90% H2O/10% D2O0.26.6ambient303
142D 1H-15N HSQC IPAP50 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM EDTA, 0.02 % sodium azide, 1 X HALT90% H2O/10% D2O0.26.6ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianVNMRS900
2VarianVNMRS800
3VarianINOVA600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsSPARKY
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number9
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSPARKYGoddard
2structure solutionCS-NOE-RDC_RosettaDavid Baker
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4refinementCS-NOE-RDC_RosettaDavid Baker