2AJM

NMR structure of the in-plane membrane anchor domain [1-28] of the monotopic NonStructural Protein 5A (NS5A) from the Bovine Viral Diarrhea Virus (BVDV)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient303
22D NOESY2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient303
31H 13C HSQC2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient303
4DQF-COSY2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient303
52D TOCSY2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient313
62D NOESY2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient313
71H 13C HSQC2 mM BVDV NS5A[1-28], 100 mM Sodium DodecylSulfate-d25 in H2O100 mM SDS-d25null4.5ambient313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS500
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing and energy minimizationXPLOR-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number9
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionXPLOR-NIH2.0.6Brunger, A.T.
2processingVNMR6.1VARIAN
3data analysisSparky3.110Goddard T.D. and Kneller D.G.
4data analysisPROCHECK-NMR3.5.4Laskowski, R.A. and MacArthur, M.
5refinementXPLOR-NIH2.0.6Brunger, A.T.