1VSD

ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.5pH 7.5 THE PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, 100 MILLI-MOLAR HEPES PH 7.5. CRYSTALS WERE THEN SOAKED IN 500 MILLI-MOLAR MGCL2.
Crystal Properties
Matthews coefficientSolvent content
2.6653.78

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.05α = 90
b = 66.05β = 90
c = 81.65γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray295IMAGE PLATEMAR scanner 300 mm plate1995-05-30M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE

Data Collection

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.7821633091.60.150.19127.46
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor37.4
p_staggered_tor15.6
p_scangle_it7.771
p_scbond_it5.046
p_mcangle_it3.657
p_planar_tor3
p_mcbond_it2.238
p_xhyhbond_nbd0.248
p_singtor_nbd0.191
p_multtor_nbd0.167
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor37.4
p_staggered_tor15.6
p_scangle_it7.771
p_scbond_it5.046
p_mcangle_it3.657
p_planar_tor3
p_mcbond_it2.238
p_xhyhbond_nbd0.248
p_singtor_nbd0.191
p_multtor_nbd0.167
p_chiral_restr0.136
p_angle_d0.037
p_planar_d0.037
p_plane_restr0.015
p_bond_d0.013
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1127
Nucleic Acid Atoms
Solvent Atoms173
Heterogen Atoms16

Software

Software
Software NamePurpose
PROLSQrefinement
DENZOdata reduction
SCALEPACKdata scaling