6W2D
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
K [auth Z] | PF06112 | e6w2dZ1 | A: alpha bundles | X: Smallest capsid protein (SCP) (From Topology) | H: Smallest capsid protein (SCP) (From Topology) | T: Smallest capsid protein (SCP) | F: PF06112 | ECOD (1.6) |
L [auth a] | PF06112 | e6w2da1 | A: alpha bundles | X: Smallest capsid protein (SCP) (From Topology) | H: Smallest capsid protein (SCP) (From Topology) | T: Smallest capsid protein (SCP) | F: PF06112 | ECOD (1.6) |
M [auth d] | PF06112 | e6w2dd1 | A: alpha bundles | X: Smallest capsid protein (SCP) (From Topology) | H: Smallest capsid protein (SCP) (From Topology) | T: Smallest capsid protein (SCP) | F: PF06112 | ECOD (1.6) |
N [auth e] | PF06112 | e6w2de1 | A: alpha bundles | X: Smallest capsid protein (SCP) (From Topology) | H: Smallest capsid protein (SCP) (From Topology) | T: Smallest capsid protein (SCP) | F: PF06112 | ECOD (1.6) |
O [auth u] | PF06112 | e6w2du1 | A: alpha bundles | X: Smallest capsid protein (SCP) (From Topology) | H: Smallest capsid protein (SCP) (From Topology) | T: Smallest capsid protein (SCP) | F: PF06112 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth J], B [auth K], C [auth N], D [auth O], E [auth P] | PF03122 | Herpes virus major capsid protein (Herpes_MCP) | Herpes virus major capsid protein | - | Family |
F [auth v] | PF04559 | Herpesvirus UL17 protein (Herpes_UL17) | Herpesvirus UL17 protein | - | Family |
G [auth w], H [auth x] | PF01499 | Herpesvirus UL25 family (Herpes_UL25) | Herpesvirus UL25 family | - | Family |
K [auth Z], L [auth a], M [auth d], N [auth e], O [auth u] | PF06112 | Gammaherpesvirus capsid protein (Herpes_capsid) | Gammaherpesvirus capsid protein | - | Family |
P [auth f], Q [auth h] | PF03327 | Herpesvirus capsid shell protein VP19C (Herpes_VP19C) | Herpesvirus capsid shell protein VP19C | - | Family |
R [auth k], S [auth m], T [auth p], U [auth r] | PF01802 | Herpesvirus VP23 like capsid protein (Herpes_V23) | Herpesvirus VP23 like capsid protein | - | Family |