6U5J

CryoEM Structure of Pyocin R2 - postcontracted - collar


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth a]PF17482e6u5ja1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
B [auth a]PF04984,PF22671e6u5ja2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
H [auth b]PF17482e6u5jb1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
H [auth b]PF04984,PF22671e6u5jb2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
I [auth c]PF17482e6u5jc1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
I [auth c]PF04984,PF22671e6u5jc2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
J [auth d]PF17482e6u5jd1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
J [auth d]PF04984,PF22671e6u5jd2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
K [auth e]PF17482e6u5je2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
K [auth e]PF04984,PF22671e6u5je1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
L [auth f]PF17482e6u5jf1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
L [auth f]PF04984,PF22671e6u5jf2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
M [auth g]PF17482e6u5jg2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
M [auth g]PF04984,PF22671e6u5jg1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
N [auth h]PF17482e6u5jh2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
N [auth h]PF04984,PF22671e6u5jh1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
O [auth l]PF17482e6u5jl1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
O [auth l]PF04984,PF22671e6u5jl2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
P [auth k]PF17482e6u5jk2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
P [auth k]PF04984,PF22671e6u5jk1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
Q [auth j]PF17482e6u5jj2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
Q [auth j]PF04984,PF22671e6u5jj1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
R [auth i]PF17482e6u5ji2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
R [auth i]PF04984,PF22671e6u5ji1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
S [auth m]PF17482e6u5jm2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
S [auth m]PF04984,PF22671e6u5jm1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
T [auth n]PF17482e6u5jn2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
T [auth n]PF04984,PF22671e6u5jn1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
U [auth r]PF17482e6u5jr2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
U [auth r]PF04984,PF22671e6u5jr1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
V [auth q]PF17482e6u5jq2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
V [auth q]PF04984,PF22671e6u5jq1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
W [auth p]PF17482e6u5jp1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
W [auth p]PF04984,PF22671e6u5jp2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)
X [auth o]PF17482e6u5jo2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: PF17482ECOD (1.6)
X [auth o]PF04984,PF22671e6u5jo1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: PF04984,PF22671ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17482Phage tail sheath C-terminal domain (Phage_sheath_1C)Phage tail sheath C-terminal domainThis entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].Domain
PF04984Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)Phage tail sheath protein subtilisin-like domainThis entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.Domain