6F8F
Co-crystal structure of SPOP MATH domain and human Pdx1 fragment
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | TRAF domain-like | 8039223 | 3001027 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF22486 | e6f8fD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: TRAF domain-like (From Topology) | T: TRAF domain-like | F: PF22486 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 2.60.210.10 | Mainly Beta | Sandwich | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF00917 | MATH domain (MATH) | MATH domain | This motif has been called the Meprin And TRAF-Homology (MATH) domain. This domain is hugely expanded in the nematode C. elegans [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D] | IPR000210 | BTB/POZ domain | Domain |
A [auth D] | IPR034089 | SPOP, C-terminal BACK domain | Domain |
A [auth D] | IPR008974 | TRAF-like | Homologous Superfamily |
A [auth D] | IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily |
A [auth D] | IPR002083 | MATH/TRAF domain | Domain |
B [auth G] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
B [auth G] | IPR020479 | Homeodomain, metazoa | Domain |
B [auth G] | IPR001356 | Homeodomain | Domain |
B [auth G] | IPR017995 | Homeobox protein, antennapedia type | Family |
B [auth G] | IPR017970 | Homeobox, conserved site | Conserved Site |