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5TCB
Structure of the glycoside hydrolase domain of PelA from Pseudomonas aeruginosa
External Resource: Annotation
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
PF03537
e5tcbA1
A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels (From Topology)
T: TIM barrels
F: PF03537
ECOD (1.6)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF03537
Glycoside-hydrolase family GH114 (Glyco_hydro_114)
Glycoside-hydrolase family GH114
This family is recognised as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases [1].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
PelA
deacetylase activity
hydrolase activity
catalytic activity
carbohydrate metabolic process
polysaccharide biosynthetic process
cellular biosynthetic process
carbohydrate biosynthetic process
cellular metabolic process
primary metabolic process
macromolecule biosynthetic process
extracellular polysaccharide biosynthetic process
polysaccharide metabolic process
organic substance metabolic process
biosynthetic process
organic substance biosynthetic process
metabolic process
cellular process
carbohydrate metabolic process
polysaccharide biosynthetic process
cellular biosynthetic process
carbohydrate biosynthetic process
cellular metabolic process
primary metabolic process
macromolecule biosynthetic process
extracellular polysaccharide biosynthetic process
polysaccharide metabolic process
organic substance metabolic process
biosynthetic process
organic substance biosynthetic process
metabolic process
cellular process
extracellular polysaccharide metabolic process
macromolecule metabolic process
cell aggregation
biofilm formation
biological process involved in intraspecies interaction between organisms
single-species biofilm formation
aggregation of unicellular organisms
Less
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR011330
Glycoside hydrolase/deacetylase, beta/alpha-barrel
Homologous Superfamily
A
IPR004352
Glycoside-hydrolase family GH114, TIM-barrel domain
Domain
A
IPR017853
Glycoside hydrolase superfamily
Homologous Superfamily
A
IPR013785
Aldolase-type TIM barrel
Homologous Superfamily
A
IPR016062
Hypothetical protein TM1410-related
Family
A
IPR016925
Uncharacterised conserved protein UCP029570
Family
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