5KP9
Structure of Nanoparticle Released from Enveloped Protein Nanoparticle
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Aldolase | 8033008 | 3000445 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF01081 | e5kp9B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01081 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF01081 | KDPG and KHG aldolase (Aldolase) | KDPG and KHG aldolase | This family includes the following members: 4-hydroxy-2-oxoglutarate aldolase (KHG-aldolase) Phospho-2-dehydro-3-deoxygluconate aldolase (KDPG-aldolase) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR000071 | Immunodeficiency lentiviral matrix, N-terminal | Domain |
A [auth B] | IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain |
A [auth B] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
A [auth B] | IPR001878 | Zinc finger, CCHC-type | Domain |
A [auth B] | IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
A [auth B] | IPR010999 | Retroviral matrix protein | Homologous Superfamily |
A [auth B] | IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily |
A [auth B] | IPR014817 | Gag protein p6 | Domain |
A [auth B] | IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |
A [auth B] | IPR000887 | KDPG/KHG aldolase | Family |
A [auth B] | IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |