5J8Y
Crystal structure of the Scm-SAM and Sfmbt-SAM heterodimer
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SAM/Pointed domain | 8032290 | 3000479 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SAM/Pointed domain | 8032290 | 3000479 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SAM/Pointed domain | 8080800 | 3000479 | SCOP2B (2022-06-29) |
D | SCOP2 Family | SAM (sterile alpha motif) domain | 8080799 | 4001022 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | SAM/Pointed domain | 8080800 | 3000479 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00536 | e5j8yA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF00536 | ECOD (1.6) |
B | PF00536 | e5j8yB1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF00536 | ECOD (1.6) |
C | PF00536 | e5j8yC1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF00536 | ECOD (1.6) |
D | PF00536 | e5j8yD1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF00536 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.50 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
B | 1.10.150.50 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
C | 1.10.150.50 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
D | 1.10.150.50 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00536 | SAM domain (Sterile alpha motif) (SAM_1) | SAM domain (Sterile alpha motif) | It has been suggested that SAM is an evolutionarily conserved protein binding domain that is involved in the regulation of numerous developmental processes in diverse eukaryotes. The SAM domain can potentially function as a protein interaction module ... | Domain | |
PF00536 | SAM domain (Sterile alpha motif) (SAM_1) | SAM domain (Sterile alpha motif) | It has been suggested that SAM is an evolutionarily conserved protein binding domain that is involved in the regulation of numerous developmental processes in diverse eukaryotes. The SAM domain can potentially function as a protein interaction module ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038348 | SLED domain superfamily | Homologous Superfamily | |
IPR004092 | Mbt repeat | Repeat | |
IPR021987 | SLED domain | Domain | |
IPR012313 | Zinc finger, FCS-type | Domain | |
IPR047531 | Sex comb on midleg-like, SAM domain | Domain | |
IPR010507 | Zinc finger, MYM-type | Domain | |
IPR013761 | Sterile alpha motif/pointed domain superfamily | Homologous Superfamily | |
IPR001660 | Sterile alpha motif domain | Domain | |
IPR004092 | Mbt repeat | Repeat | |
IPR013761 | Sterile alpha motif/pointed domain superfamily | Homologous Superfamily | |
IPR037605 | Sfmbt, SAM domain | Domain | |
IPR047358 | Polycomb protein Sfmbt, first MBT repeat | Repeat | |
IPR012313 | Zinc finger, FCS-type | Domain | |
IPR047360 | Polycomb protein Sfmbt, third MBT repeat | Repeat | |
IPR038603 | FCS-type zinc finger superfamily | Homologous Superfamily | |
IPR047359 | Polycomb protein Sfmbt, second MBT repeat | Repeat | |
IPR001660 | Sterile alpha motif domain | Domain |