5AK9
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Homing endonucleases | 8035762 | 3000266 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Homing endonucleases | 8035767 | 3000266 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Homing endonucleases | 8035767 | 3000266 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Homing endonucleases | 8035762 | 3000266 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Homing endonucleases | 8035767 | 3000266 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Homing endonucleases | 8035762 | 3000266 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14528 | e5ak9A1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF14528 | ECOD (1.6) |
E | PF14528 | e5ak9E2 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF14528 | ECOD (1.6) |
I [auth J] | PF14528 | e5ak9J1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF14528 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
E | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
I [auth J] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E, I [auth J] | PF14528 | LAGLIDADG-like domain (LAGLIDADG_3) | LAGLIDADG-like domain | This domain is part of the LAGLIDADG superfamily [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, E, I [auth J] | IPR004860 | Homing endonuclease, LAGLIDADG | Domain |
A, E, I [auth J] | IPR006142 | Intein | Domain |
A, E, I [auth J] | IPR004042 | Intein DOD homing endonuclease | Domain |
A, E, I [auth J] | IPR027434 | Homing endonuclease | Homologous Superfamily |