3EFC
Crystal Structure of YaeT periplasmic domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | POTRA domain-like | 8052271 | 3002100 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | POTRA domain-like | 8052272 | 3002100 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | POTRA domain-like | 8052273 | 3002100 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | POTRA domain-like | 8052274 | 3002100 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF07244 | e3efcA5 | A: a+b duplicates or obligate multimers | X: Polypeptide transport-associated (POTRA) domain (From Topology) | H: Polypeptide transport-associated (POTRA) domain (From Topology) | T: Polypeptide transport-associated (POTRA) domain | F: PF07244 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.310 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | membrane protein fhac | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07244 | Surface antigen variable number repeat (POTRA) | Surface antigen variable number repeat | This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039910 | Surface antigen D15-like | Family | |
IPR034746 | POTRA domain | Domain | |
IPR000184 | Bacterial surface antigen (D15) | Domain | |
IPR010827 | POTRA domain, BamA/TamA-like | Domain | |
IPR023707 | Outer membrane protein assembly factor BamA | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Omp85-TpsB transporters (n=16,S=20,22) | OMP insertion (Bam complex) porin (n=16,S=22) |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Omp85-TpsB Outer Membrane Transporter Superfamily | BamA21-410 POTRA domains (periplasmic fragment) |