3AJF

Structural insigths into dsRNA binding and RNA silencing suppression by NS3 protein of rice hoja blanca tenuivirus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	RHBV NS3 N-terminal domain (NS3NTD)-like	8047070	4005431	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	NS3/CdiI-like	8104096	3002822	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	NS3/CdiI-like	8104096	3002822	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	NS3/CdiI-like	8104096	3002822	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	NS3/CdiI-like	8104096	3002822	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Tenui_NS3	e3ajfA1	A: alpha arrays	X: Non-structural protein 3 (From Topology)	H: Non-structural protein 3 (From Topology)	T: Non-structural protein 3	F: Tenui_NS3	ECOD (1.6)
B	Tenui_NS3	e3ajfB1	A: alpha arrays	X: Non-structural protein 3 (From Topology)	H: Non-structural protein 3 (From Topology)	T: Non-structural protein 3	F: Tenui_NS3	ECOD (1.6)
C	Tenui_NS3	e3ajfC1	A: alpha arrays	X: Non-structural protein 3 (From Topology)	H: Non-structural protein 3 (From Topology)	T: Non-structural protein 3	F: Tenui_NS3	ECOD (1.6)
D	Tenui_NS3	e3ajfD1	A: alpha arrays	X: Non-structural protein 3 (From Topology)	H: Non-structural protein 3 (From Topology)	T: Non-structural protein 3	F: Tenui_NS3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1440.190	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Tenuivirus movement protein	CATH (4.3.0)
B	1.20.1440.190	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Tenuivirus movement protein	CATH (4.3.0)
C	1.20.1440.190	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Tenuivirus movement protein	CATH (4.3.0)
D	1.20.1440.190	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Tenuivirus movement protein	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF05310	Tenuivirus movement protein (Tenui_NS3)	Tenuivirus movement protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Non-structural protein 3	RNA binding binding organic cyclic compound binding nucleic acid binding	-	host cellular component host intracellular part host cell cytoplasm host cell part host intracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR043105	Tenuivirus NS3	Homologous Superfamily
A, B, C, D	IPR007974	Tenuivirus movement protein	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.