2ZNF

HIGH-RESOLUTION STRUCTURE OF AN HIV ZINC FINGERLIKE DOMAIN VIA A NEW NMR-BASED DISTANCE GEOMETRY APPROACH


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2znfa_ Small proteins Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains GAG protein p55 (Human immunodeficiency virus 1 ) [TaxId: 11676 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyRetrovirus zinc finger-like domains8026708 4003651 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRetroviral zinc finger-like domains8039087 3001193 SCOP2 (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00098Zinc knuckle (zf-CCHC)Zinc knuckleThe zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eu ...The zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eukaryotic gene regulation, such as C. elegans GLH-1. Structure is an 18-residue zinc finger.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001878Zinc finger, CCHC-typeDomain
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily